The Rainbow Prim Algorithm for Selecting Putative Orthologous Protein Sequences
Anna Rosa Troisi1
Giovanni Aloisio1
Ivan Rossi2
Piero Fariselli2
Fariselli Casadio, *
, 2
Authors Info & Affiliations
, 2
Authors Info & Affiliations
Abstract
We present a selection method designed for eliminating species redundancy in clusters of putative orthologous sequences, to be applied as a post-processing procedure to pre-clustered data obtained from other methods. The algorithm can always zero-out the cluster redundancy while preserving the number of species of the original cluster
